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WormBase Tree Display for Gene: WBGene00060438

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Name Class

WBGene00060438SMapS_parentSequenceCrem_Contig11
IdentityVersion3
NameCGC_nameCre-smo-1From_analysisInferred_from_orthology
Sequence_nameCRE03675
Molecular_nameCRE03675
CRE03675.1
RP26003
Other_namecr01.sctg18.wum.81
Public_nameCre-smo-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:39WBPerson2970Name_changeCGC_nameCre-smo-1
303 Jul 2008 11:45:32WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03675
Other_namecr01.sctg18.wum.81
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsmo
RNASeq_FPKMWBls:00000041016.83From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1206.51From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1396.18From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027139.64From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
264.065From_analysisRNASeq.remanei.WBls:0000027.control_mean
303.199From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
303.778From_analysisRNASeq.remanei.WBls:0000027.control_median
304.357From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
309.065From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:0000038149.089From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
251.858From_analysisRNASeq.remanei.WBls:0000038.control_mean
268.688From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
337.796From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041267.026From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
293.392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
296.839From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
413.891From_analysisRNASeq.remanei.WBls:0000041.control_mean
414.569From_analysisRNASeq.remanei.WBls:0000041.control_median
532.298From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
544.529From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
549.259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:0000101276.197From_analysisRNASeq.remanei.total_over_all_stages.control_median
353.818From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Rad60/SUMO-like domain; Ubiquitin-2 like Rad60 SUMO-like; Ubiquitin-like domain superfamily; and Ubiquitin-like domain. Is an ortholog of C. elegans smo-1. In C. elegans, smo-1 is involved in several processes, including chromosome organization; multicellular organismal locomotion; and muscle cell cellular homeostasis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03675
Corresponding_transcriptCRE03675.1
Other_sequence (109)
Experimental_infoExpr_patternExpr1100654
Microarray_resultsGPL14146_CRE03675_156-215_0.940_2_A
GPL14146_CRE03675_287-346_0.622_39_C
GPL14146_CRE03675_75-134_0.948_1_B
MethodGene