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WormBase Tree Display for Gene: WBGene00060933

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Name Class

WBGene00060933SMapS_parentSequenceCrem_Contig34
IdentityVersion3
NameCGC_nameCre-rab-5From_analysisInferred_from_orthology
Sequence_nameCRE20706
Molecular_nameCRE20706
CRE20706.1
RP23885
Other_namecr01.sctg20.wum.124
Public_nameCre-rab-5
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-rab-5
303 Jul 2008 11:45:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE20706
Other_namecr01.sctg20.wum.124
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:000000494.7231From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
96.7997From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
98.8762From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027151.786From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
153.123From_analysisRNASeq.remanei.WBls:0000027.control_mean
170.436From_analysisRNASeq.remanei.WBls:0000027.control_median
189.085From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
239.718From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
31.9014From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038107.217From_analysisRNASeq.remanei.WBls:0000038.control_mean
138.165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
146.174From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
37.3109From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041160.375From_analysisRNASeq.remanei.WBls:0000041.control_median
160.628From_analysisRNASeq.remanei.WBls:0000041.control_mean
233.769From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
237.795From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
240.536From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
82.1668From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
82.5208From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
86.9802From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:0000101118.135From_analysisRNASeq.remanei.total_over_all_stages.control_mean
97.5714From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00156306
00156307
Ortholog (33)
Paralog (33)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-5. In C. elegans, rab-5 is involved in embryo development; protein localization; and vesicle-mediated transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE20706
Corresponding_transcriptCRE20706.1
Other_sequence (77)
Experimental_infoExpr_patternExpr1115608
Microarray_resultsGPL14146_CRE20706_438-497_0.931_5_A
MethodGene