WormBase Tree Display for Gene: WBGene00063529

WBGene00063529 SMap: S_parent: Sequence: Crem_Contig33
  Identity: Version: 3
    Name: CGC_name: Cre-pha-4 From_analysis: Inferred_from_orthology
      Sequence_name: CRE21246
      Molecular_name: CRE21246
        CRE21246.1
        RP43271
      Other_name: cr01.sctg40.wum.17
      Public_name: Cre-pha-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:52 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE21246
                Other_name: cr01.sctg40.wum.17
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cre-pha-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pha
    RNASeq_FPKM: WBls:0000004 28.5215 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        31.2285 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        33.9354 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 13.22 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        14.6146 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        15.1461 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        17.0722 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        20.5443 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.62201 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 6.22603 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.31463 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBls:0000038.control_median
        6.78327 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.80914 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 2.74234 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.37315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.62313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.7709 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.91867 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.95705 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.66116 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.42383 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 6.63206 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        9.29244 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00158979
      00158980
      00158981
    Ortholog (27)
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans pha-4. In C. elegans, pha-4 is involved in several processes, including determination of adult lifespan; pharynx development; and positive regulation of metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE21246
    Corresponding_transcript: CRE21246.1
    Other_sequence: CBC02574_1
      FC545405.1
      JI165106.1
      SS00024
      SSC05465_1
      ACC29517_1
      Oden_isotig19666
  Experimental_info: Expr_pattern: Expr1109860
    Microarray_results: GPL14146_CRE21246_1009-1068_0.934_4_B
      GPL14146_CRE21246_1145-1204_0.897_25_A
  Method: Gene