WormBase Tree Display for Gene: WBGene00065065

WBGene00065065 SMap: S_parent: Sequence: Crem_Contig60
  Identity: Version: 3
    Name: CGC_name: Cre-chw-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12834
      Molecular_name: CRE12834
        CRE12834.1
        RP00282
      Other_name: cr01.sctg56.wum.55
      Public_name: Cre-chw-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-chw-1
        3 03 Jul 2008 11:46:02 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12834
                Other_name: cr01.sctg56.wum.55
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chw
    RNASeq_FPKM: WBls:0000004 3.4235 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        4.54413 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.66476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.1274 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        17.7542 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        18.5431 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.8758 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        19.2085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        23.1376 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 13.1034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        38.3867 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        44.7411 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        57.3156 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 5.401 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        5.49829 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.85218 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        6.48273 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        6.90091 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        7.11327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        8.0482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        9.49254 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 13.593 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        9.34163 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00160339
      00160340
    Ortholog (29)
    Paralog: WBGene00054399 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058267 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062803 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065063 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00071928 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00073271 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00075387 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00082066 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00086259 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans chw-1. In C. elegans, chw-1 is involved in establishment or maintenance of cell polarity and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12834
    Corresponding_transcript: CRE12834.1
    Other_sequence: Oden_isotig21620
      CR01151
      Oden_isotig24504
      JI178731.1
      CRC02711_1
  Experimental_info: Expr_pattern: Expr1105210
    Microarray_results: GPL14146_CRE12834_284-343_0.933_2_A
      GPL14146_CRE12834_512-571_0.958_1_B
      GPL14146_CRE12834_70-129_0.929_3_C
  Method: Gene