WormBase Tree Display for Gene: WBGene00065310

WBGene00065310 SMap: S_parent: Sequence: Crem_Contig31
  Identity: Version: 3
    Name: CGC_name: Cre-hlb-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22427
      Molecular_name: CRE22427
        CRE22427.1
        RP35049
      Other_name: cr01.sctg59.wum.66
      Public_name: Cre-hlb-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:04 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22427
                Other_name: cr01.sctg59.wum.66
        3 23 Apr 2010 14:43:28 WBPerson2970 Name_change: CGC_name: Cre-hlb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hlb
    RNASeq_FPKM: WBls:0000004 6.10207 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        6.76459 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.42711 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 17.8356 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        17.9413 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        19.8745 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        21.8078 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        24.9956 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.59776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 16.8799 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        21.0914 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        21.6024 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        7.94605 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 3.15665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.23585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.35539 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        4.17427 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.31825 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.99315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.51898 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        5.64947 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 6.8029 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        9.25367 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00058442 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-beta; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans hlb-1. In C. elegans, hlb-1 is involved in several processes, including neuromuscular junction development; positive regulation of locomotion; and regulation of pharyngeal pumping. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22427
    Corresponding_transcript: CRE22427.1
    Other_sequence (30)
  Experimental_info: Expr_pattern: Expr1107098
    Microarray_results: GPL14146_CRE22427_2224-2283_0.903_7_C
      GPL14146_CRE22427_2503-2562_0.886_19_B
      GPL14146_CRE22427_2680-2739_0.816_64_A
  Method: Gene