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WormBase Tree Display for Gene: WBGene00066289

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Name Class

WBGene00066289SMapS_parentSequenceCrem_Contig67
IdentityVersion4
NameCGC_nameCre-nlr-1.1From_analysisInferred_from_orthology
Sequence_nameCRE15562
Molecular_nameCRE15562
CRE15562.1
RP34860
Other_namecr01.sctg73.wum.28
Cre-nlr-1From_analysisInferred_from_orthology
Public_nameCre-nlr-1.1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-nlr-1
303 Jul 2008 11:46:09WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE15562
Other_namecr01.sctg73.wum.28
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCre-nlr-1.1
Other_nameCre-nlr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlr
RNASeq_FPKMWBls:00000042.26444From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.53287From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.8013From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.10952From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.12018From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.21434From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.29235From_analysisRNASeq.remanei.WBls:0000027.control_median
1.37035From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.78652From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.42141From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
1.78073From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.45From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.47079From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.11729From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.154From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.17659From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.29342From_analysisRNASeq.remanei.WBls:0000041.control_median
1.31525From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.41025From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.42409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1.60925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001011.17861From_analysisRNASeq.remanei.total_over_all_stages.control_mean
1.19546From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00161316
Ortholog (15)
Paralog (58)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans nlr-1. In C. elegans, nlr-1 is involved in positive regulation of gap junction assembly and positive regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE15562
Corresponding_transcriptCRE15562.1
Other_sequence (14)
MethodGene