WormBase Tree Display for Gene: WBGene00068887

expand all nodes | collapse all nodes | view schema

WBGene00068887	SMap	S_parent	Sequence	Crem_Contig262
	Identity	Version	3
		Name	CGC_name	Cre-cng-2	From_analysis	Inferred_from_orthology
			Sequence_name	CRE14330
			Molecular_name	CRE14330
				CRE14330.1
				RP27962
			Other_name	cr01.sctg129.wum.13
			Public_name	Cre-cng-2
		Species	Caenorhabditis remanei
		History	Version_change	1	09 Nov 2007 10:19:28	WBPerson1847	Event	Created
				2	03 Jul 2008 11:46:23	WBPerson4055	Event	Imported	from NGASP
							Name_change	Sequence_name	CRE14330
								Other_name	cr01.sctg129.wum.13
				3	12 Jul 2011 12:19:59	WBPerson2970	Name_change	CGC_name	Cre-cng-2
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	cng
		RNASeq_FPKM	WBls:0000004	0.20845	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
				0.229273	From_analysis	RNASeq.remanei.WBls:0000004.control_mean
						RNASeq.remanei.WBls:0000004.control_median
				0.250097	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
			WBls:0000024 (53)
			WBls:0000027	0.190196	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
				0.222643	From_analysis	RNASeq.remanei.WBls:0000027.control_median
				0.25509	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
				0.332576	From_analysis	RNASeq.remanei.WBls:0000027.control_mean
				0.885017	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
			WBls:0000038	0.035115	From_analysis	RNASeq.remanei.WBls:0000038.control_mean
				0.105344	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
						RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
						RNASeq.remanei.WBls:0000038.control_median
			WBls:0000041	0.027896	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
				0.035908	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
				0.044581	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
				0.076849	From_analysis	RNASeq.remanei.WBls:0000041.control_median
				0.084617	From_analysis	RNASeq.remanei.WBls:0000041.control_mean
				0.109117	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
				0.119211	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
				0.17099	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
			WBls:0000063	0.024718	From_analysis	RNASeq.remanei.WBls:0000063.control_mean
				0.05865	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
				0.18853	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
						RNASeq.remanei.WBls:0000063.control_median
			WBls:0000101	0.031902	From_analysis	RNASeq.remanei.total_over_all_stages.control_median
				0.101888	From_analysis	RNASeq.remanei.total_over_all_stages.control_mean
		GO_annotation	00163346
			00163347
			00163348
			00163349
		Ortholog (24)
		Paralog	WBGene00055150	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00070409	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00070259	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00073350	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00068888	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00059947	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00061624	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00062089	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00086104	Caenorhabditis remanei	From_analysis	WormBase-Compara
		Structured_description	Automated_description	Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cng-2.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CRE14330
		Corresponding_transcript	CRE14330.1
		Other_sequence	Dviv_isotig18139
			ACC36632_1
			CR08580
			EY471447.1
			Acan_isotig17526
			Oden_isotig16694
			JI168297.1
			Oden_isotig16695
	Experimental_info	Expr_pattern	Expr1105361
		Microarray_results	GPL14146_CRE14330_1759-1818_0.858_38_A
	Method	Gene