WormBase Tree Display for Gene: WBGene00069801

WBGene00069801 SMap: S_parent: Sequence: Crem_Contig175
  Identity: Version: 3
    Name: CGC_name: Cre-ttx-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07788
      Molecular_name: CRE07788
        CRE07788.1
        RP36739
      Other_name: cr01.sctg161.wum.5
      Public_name: Cre-ttx-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07788
                Other_name: cr01.sctg161.wum.5
        3 04 Jul 2008 11:06:45 WBPerson4055 Name_change: CGC_name: Cre-ttx-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttx
    RNASeq_FPKM: WBls:0000004 4.1802 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        4.76293 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.34565 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 12.5275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        13.9929 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        14.7608 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        15.4583 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.67798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        28.3794 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.11657 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        4.09778 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        5.41649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        5.76028 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.717072 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.956085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.38185 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.51409 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.5355 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.68915 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1.98753 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.35284 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.170699 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.543626 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.916554 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.09878 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        1.53657 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.16372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        2.60777 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        8.40816 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
      WBls:0000101 1.83834 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.05048 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00164084
    Ortholog (27)
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans ttx-1. In C. elegans, ttx-1 is involved in several processes, including regulation of plasma membrane bounded cell projection assembly; thermosensory behavior; and transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07788
    Corresponding_transcript: CRE07788.1
    Other_sequence (16)
  Experimental_info: Expr_pattern: Expr1114375
    Microarray_results: GPL14146_CRE07788_1092-1151_0.958_5_A
      GPL14146_CRE07788_1107-1166_0.974_1_C
      GPL14146_CRE07788_608-667_0.652_126_B
  Method: Gene