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WormBase Tree Display for Gene: WBGene00070603

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Name Class

WBGene00070603SMapS_parentSequenceCrem_Contig208
IdentityVersion3
NameCGC_nameCre-unc-27From_analysisInferred_from_orthology
Sequence_nameCRE30434
Molecular_nameCRE30434
CRE30434.1
RP29161
Other_namecr01.sctg195.wum.4
Public_nameCre-unc-27
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-unc-27
303 Jul 2008 11:46:29WBPerson4055EventImportedfrom NGASP
Name_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000425.2088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
26.7465From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
28.2843From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027269.511From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
389.951From_analysisRNASeq.remanei.WBls:0000027.control_mean
410.161From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
418.126From_analysisRNASeq.remanei.WBls:0000027.control_median
426.091From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
454.041From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000381227.84From_analysisRNASeq.remanei.WBls:0000038.control_mean
1437.55From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1547.01From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
698.95From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041484.713From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
572.843From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
622.628From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
639.143From_analysisRNASeq.remanei.WBls:0000041.control_median
655.658From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
679.943From_analysisRNASeq.remanei.WBls:0000041.control_mean
854.866From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
888.948From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:0000101713.112From_analysisRNASeq.remanei.total_over_all_stages.control_median
752.035From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00164619
OrthologWBGene00006764Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035711Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00109023Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00099181Pristionchus pacificusFrom_analysisOMA
WBGene00150453Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00120959Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00227801Brugia malayiFrom_analysisWormBase-Compara
WBGene00242556Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00099182Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272388Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277836Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g3615Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11325Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g663Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11706Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g16797Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17160Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g23558Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24667Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4780Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g94Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12284Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17964Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18709Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00239.g7645Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-27Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10942Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00049.g2532Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02091Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025235Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00394Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19272Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0172300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19642Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267557Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291450Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00056523Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00058297Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00064039Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00073643Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be part of troponin complex. Is an ortholog of C. elegans unc-27. In C. elegans, unc-27 is involved in locomotion and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE30434
Corresponding_transcriptCRE30434.1
Other_sequence (126)
Experimental_infoExpr_patternExpr1092490
Microarray_resultsGPL14146_CRE30434_255-314_0.939_2_B
GPL14146_CRE30434_49-108_0.892_10_C
GPL14146_CRE30434_579-638_0.955_1_A
MethodGene