WormBase Tree Display for Gene: WBGene00071615

WBGene00071615 SMap: S_parent: Sequence: Crem_Contig211
  Identity: Version: 3
    Name: CGC_name: Cre-pax-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04314
      Molecular_name: CRE04314
        CRE04314.1
        RP32372
      Other_name: cr01.sctg264.wum.11
      Public_name: Cre-pax-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-pax-3
        3 03 Jul 2008 11:46:32 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04314
                Other_name: cr01.sctg264.wum.11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pax
    RNASeq_FPKM: WBls:0000004 1.71851 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.98862 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.25872 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.595597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0.962039 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.984788 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.37398 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.87858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.990154 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        1.55553 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.71199 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBls:0000038.control_median
        1.96444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.201002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.288088 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.344349 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.353283 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.362216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.485168 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.728775 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.986577 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.017146 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.17146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.244545 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.599017 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00165565
      00165566
    Ortholog (35)
    Paralog (21)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans pax-3. In C. elegans, pax-3 is involved in epidermal cell fate specification; gonad morphogenesis; and hemidesmosome assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04314
    Corresponding_transcript: CRE04314.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1107304
    Microarray_results: GPL14146_CRE04314_274-333_0.652_66_C
      GPL14146_CRE04314_588-647_0.519_104_B
      GPL14146_CRE04314_703-762_0.862_22_A
  Method: Gene