WormBase Tree Display for Gene: WBGene00076171

WBGene00076171 SMap: S_parent: Sequence: Crem_Contig831
  Identity: Version: 3
    Name: CGC_name: Cre-pdzd-8.2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22203
      Molecular_name: CRE22203
        CRE22203.1
        RP35055
      Other_name: cr01.sctg3688.wum.2
      Public_name: Cre-pdzd-8.2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:51 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22203
                Other_name: cr01.sctg3688.wum.2
        3 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cre-pdzd-8.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pdzd
    RNASeq_FPKM: WBls:0000004 10.0555 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        12.7461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        7.36488 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.842994 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        4.58672 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.69822 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        5.38049 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        6.17425 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        7.18892 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 1.96011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.26833 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        3.38726 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.93335 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 12.0974 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        14.9987 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        16.4104 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        17.9027 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        18.5373 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        20.6641 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        21.2781 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        21.9673 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 3.58436 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        6.89087 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00168839
      00168840
      00168841
    Ortholog (44)
    Paralog: WBGene00063872 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073520 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00085887 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in mitochondrial calcium ion homeostasis and mitochondrion-endoplasmic reticulum membrane tethering. Predicted to be located in mitochondria-associated endoplasmic reticulum membrane. Is an ortholog of C. elegans pdzd-8. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22203
    Corresponding_transcript: CRE22203.1
    Other_sequence (15)
  Experimental_info: Expr_pattern: Expr1098583
    Microarray_results: GPL14146_CRE22203_1187-1246_0.794_126_C
      GPL14146_CRE22203_1379-1438_0.822_91_B
      GPL14146_CRE22203_2161-2220_0.823_88_A
  Method: Gene