WormBase Tree Display for Gene: WBGene00077707
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WBGene00077707 | SMap | S_parent | Sequence | F39B1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | mir-1829.3 | Paper_evidence | WBPaper00031661 | |||||
Person_evidence | WBPerson18 | ||||||||
Sequence_name | F39B1.2 | ||||||||
Molecular_name | F39B1.2 | ||||||||
F39B1.2a | |||||||||
F39B1.2b | |||||||||
Other_name | mir-1829c | Remark | miRBase V21 import | ||||||
cel-mir-1829c | Remark | miRBase V21 import | |||||||
Cel-Mir-1829-P3 | Remark | MirGeneDB 2.1 import | |||||||
CELE_F39B1.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | mir-1829.3 | ||||||||
DB_info | Database | miRBase | acc | MI0006771 | |||||
MirGeneDB | cel | Cel-Mir-1829-P3 | |||||||
NDB | locus_tag | CELE_F39B1.2 | |||||||
NCBI | gene | 7040146 | |||||||
RefSeq | protein | NR_024315.2 | |||||||
RNAcentral | URSid | URS0000087309 | |||||||
URS00002B61F0 | |||||||||
URS0000789525 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 18 Apr 2008 10:17:32 | WBPerson1983 | Event | Created | |||
2 | 24 Apr 2008 10:45:50 | WBPerson2970 | Name_change | CGC_name | mir-1829c | ||||
3 | 22 Feb 2010 13:26:12 | WBPerson1983 | Name_change | CGC_name | mir-1829.3 | ||||
Other_name | mir-1829c | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001265 | |||||||
Gene_class | mir | ||||||||
Allele | WBVar01499519 | ||||||||
WBVar01760639 | |||||||||
WBVar01499710 | |||||||||
WBVar01498960 | |||||||||
WBVar01500067 | |||||||||
In_cluster | MIR-1829 | ||||||||
RNASeq_FPKM (74) | |||||||||
Structured_description | Automated_description | Is affected by several genes including eat-2; glp-4; and prg-1 based on RNA-seq studies. Is affected by nicotine and silicon dioxide nanoparticle based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | F39B1.2 | |||||||
F39B1.2a | |||||||||
F39B1.2b | |||||||||
Experimental_info | RNAi_result | WBRNAi00065088 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065087 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031974 | Inferred_automatically | RNAi_primary | |||||||
Expression_cluster (14) | |||||||||
Map_info | Map | X | Position | 22.2912 | |||||
Positive | Positive_clone | F39B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Nomenclature inconsistency fix | Curator_confirmed | WBPerson1983 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |