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WormBase Tree Display for Gene: WBGene00077707

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Name Class

WBGene00077707SMapS_parentSequenceF39B1
IdentityVersion3
NameCGC_namemir-1829.3Paper_evidenceWBPaper00031661
Person_evidenceWBPerson18
Sequence_nameF39B1.2
Molecular_nameF39B1.2
F39B1.2a
F39B1.2b
Other_namemir-1829cRemarkmiRBase V21 import
cel-mir-1829cRemarkmiRBase V21 import
Cel-Mir-1829-P3RemarkMirGeneDB 2.1 import
CELE_F39B1.2Accession_evidenceNDBBX284606
Public_namemir-1829.3
DB_infoDatabasemiRBaseaccMI0006771
MirGeneDBcelCel-Mir-1829-P3
NDBlocus_tagCELE_F39B1.2
NCBIgene7040146
RefSeqproteinNR_024315.2
RNAcentralURSidURS0000087309
URS00002B61F0
URS0000789525
SpeciesCaenorhabditis elegans
HistoryVersion_change118 Apr 2008 10:17:32WBPerson1983EventCreated
224 Apr 2008 10:45:50WBPerson2970Name_changeCGC_namemir-1829c
322 Feb 2010 13:26:12WBPerson1983Name_changeCGC_namemir-1829.3
Other_namemir-1829c
StatusLive
Gene_infoBiotypeSO:0001265
Gene_classmir
AlleleWBVar01499519
WBVar01760639
WBVar01499710
WBVar01498960
WBVar01500067
In_clusterMIR-1829
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by several genes including eat-2; glp-4; and prg-1 based on RNA-seq studies. Is affected by nicotine and silicon dioxide nanoparticle based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF39B1.2
F39B1.2a
F39B1.2b
Experimental_infoRNAi_resultWBRNAi00065088Inferred_automaticallyRNAi_primary
WBRNAi00065087Inferred_automaticallyRNAi_primary
WBRNAi00031974Inferred_automaticallyRNAi_primary
Expression_cluster (14)
Map_infoMapXPosition22.2912
PositivePositive_cloneF39B1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkNomenclature inconsistency fixCurator_confirmedWBPerson1983
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene