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WormBase Tree Display for Gene: WBGene00079802

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Name Class

WBGene00079802SMapS_parentSequenceCrem_Contig16
IdentityVersion2
NameCGC_nameCre-ocrl-1From_analysisInferred_from_orthology
Sequence_nameCRE08189
Molecular_nameCRE08189
CRE08189.1
RP39624
Public_nameCre-ocrl-1
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:53WBPerson4055EventCreated
204 Jul 2008 11:06:47WBPerson4055Name_changeCGC_nameCre-ocrl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classocrl
RNASeq_FPKMWBls:000000411.7093From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
12.4769From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
13.2445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.2381From_analysisRNASeq.remanei.WBls:0000027.control_mean
11.1146From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
11.5621From_analysisRNASeq.remanei.WBls:0000027.control_median
12.0096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
15.8165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.01163From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000381.05619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
12.0355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
7.21169From_analysisRNASeq.remanei.WBls:0000038.control_mean
8.54338From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:000004115.8993From_analysisRNASeq.remanei.WBls:0000041.control_median
16.5674From_analysisRNASeq.remanei.WBls:0000041.control_mean
23.496From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
25.0248From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
26.2878From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.12365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
8.16982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
8.30254From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001017.51502From_analysisRNASeq.remanei.total_over_all_stages.control_median
9.08362From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00170030
00170031
00170032
00170033
Ortholog (33)
ParalogWBGene00054782Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00059293Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00061174Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066603Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072763Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073117Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00085850Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation and signal transduction. Is an ortholog of C. elegans ocrl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE08189
Corresponding_transcriptCRE08189.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1110379
Microarray_resultsGPL14146_CRE08189_1031-1090_0.854_38_A
MethodGene