WormBase Tree Display for Gene: WBGene00090011

WBGene00090011 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 5
    Name: CGC_name: Ppa-vav-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA00457
      Molecular_name: PPA00457
        PPA00457.1
        PP54766
      Other_name: GENEPREDICTION_SNAP300000057587
        GENEPREDICTION_SNAP300000057588
        UMM-S57-45.11 Person_evidence: WBPerson606
        Ppa-vav-1.2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-vav-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:48 WBPerson2970 Name_change: CGC_name: Ppa-vav-1
        3 24 Nov 2017 09:46:48 WBPerson4055 Event: Acquires_merge: WBGene00090012
        4 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Ppa-vav-1.2
                Other_name: Ppa-vav-1
        5 04 Jun 2020 14:38:21 WBPerson1983 Name_change: CGC_name: Ppa-vav-1
                Other_name: Ppa-vav-1.2
      Acquires_merge: WBGene00090012
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vav
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.45351 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        1.36053 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00173306
    Ortholog (35)
    Paralog: WBGene00089796 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090599 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100026 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103518 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111213 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans vav-1. In C. elegans, vav-1 is involved in several processes, including negative regulation of Notch signaling pathway; positive regulation of nematode male tail tip morphogenesis; and regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA00457
    Corresponding_transcript: PPA00457.1
    Other_sequence (18)
  Experimental_info: Microarray_results: GPL14372_Probes_9920
      GPL14372_Probes_9921
      GPL14372_Probes_9922
      GPL14372_Probes_9923
      GPL14372_Probes_9924
      GPL14372_Probes_9925
      GPL14372_Probes_9926
      GPL14372_Probes_9927
  Method: Gene