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WormBase Tree Display for Gene: WBGene00090212

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Name Class

WBGene00090212SMapS_parentSequencePPA_ChrX
IdentityVersion4
NameCGC_namePpa-ttr-39.1From_analysisInferred_from_orthology
Sequence_namePPA00658
Molecular_namePPA00658
PPA00658.1
PP61542
Other_nameGENEPREDICTION_SNAP300000067383
GENEPREDICTION_SNAP300000078476
GENEPREDICTION_SNAP300000080398
UMM-S344-6.21Person_evidenceWBPerson606
Public_namePpa-ttr-39.1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00111289
324 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00113057
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-ttr-39.1
Acquires_mergeWBGene00111289
WBGene00113057
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
RNASeq_FPKMWBls:000003269.6935From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.4672From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
28.7202From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00173367
Ortholog (35)
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface. Is an ortholog of C. elegans ttr-39.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA00658
Corresponding_transcriptPPA00658.1
Other_sequenceMJ01490
MI00295
MJC00048_1
MI02053
MIC06055_1
PPC03459_1
MJ01442
FG353936.1
Experimental_infoMicroarray_resultsGPL14372_Probes_80659
GPL14372_Probes_80660
GPL14372_Probes_80662
GPL14372_Probes_80663
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
MethodGene