WormBase Tree Display for Gene: WBGene00093010

WBGene00093010 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 9
    Name: CGC_name: Ppa-apa-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA03456
      Molecular_name: PPA03456
        PPA03456.1
        PP62857
      Other_name: GENEPREDICTION_SNAP300000059799
        GENEPREDICTION_SNAP300000061203
        UMA-S2845-10.0 Person_evidence: WBPerson606
      Public_name: Ppa-apa-2.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:48 WBPerson4055 Event: Acquires_merge: WBGene00093170
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-apa-2
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Ppa-apa-2
        6 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Ppa-apa-2.1
                Other_name: Ppa-apa-2
        7 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Ppa-apa-2
                Other_name: Ppa-apa-2.1
        8 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        9 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-apa-2.1
      Acquires_merge: WBGene00093170
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: apa
    RNASeq_FPKM: WBls:0000032 2.56183 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.86242 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        2.56183 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        3.02542 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00174852
      00174853
      00174854
      00174855
      00174856
      00174857
      00174858
      00174859
    Ortholog (42)
    Paralog: WBGene00094535 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111430 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281351 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable clathrin adaptor activity. Predicted to be involved in clathrin-dependent endocytosis and intracellular protein transport. Predicted to be part of AP-2 adaptor complex. Is an ortholog of C. elegans apa-2. In C. elegans, apa-2 is involved in clathrin-dependent endocytosis; embryo development; and protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03456
    Corresponding_transcript: PPA03456.1
    Other_sequence (63)
  Experimental_info: Microarray_results: GPL14372_Probes_74928
      GPL14372_Probes_74929
      GPL14372_Probes_74930
  Remark: [190208 pad] The CGC name Ppa-apa-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-apa-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    Removed duplicate Other_name Ppa-apa-2.1 Curator_confirmed: WBPerson1983
  Method: Gene