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WormBase Tree Display for Gene: WBGene00093285

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Name Class

WBGene00093285SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA03731
Molecular_namePPA03731
PPA03731.1
PP69163
Other_nameGENEPREDICTION_SNAP300000061318
UMM-S285-1.19Person_evidenceWBPerson606
Public_namePPA03731
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000321.82944From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.82944From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.05019From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.32114From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (35)
ParalogWBGene00092464Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097101Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109450Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117372Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117470Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: PH-like domain superfamily; Protein-tyrosine phosphatase-like; Myotubularin family; and Myotubularin-like phosphatase domain. Is an ortholog of C. elegans mtm-9. In C. elegans, mtm-9 is involved in pinocytosis and regulation of cell migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA03731
Corresponding_transcriptPPA03731.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14372_Probes_84772
GPL14372_Probes_84773
GPL14372_Probes_84774
GPL14372_Probes_84776
GPL14372_Probes_84777
GPL14372_Probes_84778
MethodGene