WormBase Tree Display for Gene: WBGene00093388
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| WBGene00093388 | SMap | S_parent | Sequence | PPA_ChrX | ||
|---|---|---|---|---|---|---|
| Identity | Version | 11 | ||||
| Name | CGC_name | Ppa-mec-18 | From_analysis | Inferred_from_orthology | ||
| Sequence_name | PPA03834 | |||||
| Molecular_name | PPA03834 | |||||
| PPA03834.1 | ||||||
| PP64909 | ||||||
| Other_name | GENEPREDICTION_SNAP300000061421 | |||||
| GENEPREDICTION_SNAP300000061422 | ||||||
| UMM-S2859-12.10 | Person_evidence | WBPerson606 | ||||
| Public_name | Ppa-mec-18 | |||||
| Species | Pristionchus pacificus | |||||
| History | Version_change (11) | |||||
| Acquires_merge | WBGene00093389 | |||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | mec | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
| RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| GO_annotation | 00175020 | |||||
| 00175021 | ||||||
| 00175022 | ||||||
| Ortholog (29) | ||||||
| Paralog (35) | ||||||
| Structured_description | Automated_description | Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans mec-18. In C. elegans, mec-18 is involved in detection of mechanical stimulus involved in sensory perception of touch and mechanosensory behavior. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | PPA03834 | ||||
| Corresponding_transcript | PPA03834.1 | |||||
| Other_sequence (1241) | ||||||
| Experimental_info | Microarray_results | GPL14372_Probes_2037 | ||||
| GPL14372_Probes_2038 | ||||||
| GPL14372_Probes_2039 | ||||||
| GPL14372_Probes_2040 | ||||||
| GPL14372_Probes_2041 | ||||||
| GPL14372_Probes_2042 | ||||||
| GPL14372_Probes_2043 | ||||||
| GPL14372_Probes_2044 | ||||||
| GPL14372_Probes_2045 | ||||||
| GPL14372_Probes_39098 | ||||||
| Remark | [190208 pad] The CGC name Ppa-mec-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
| [191127 pad] The CGC name Ppa-mec-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| [210528 pad] The CGC name Ppa-twk-28 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Removed duplicate Other_name Ppa-mec-18 | Curator_confirmed | WBPerson1983 | ||||
| Method | Gene |
