WormBase Tree Display for Gene: WBGene00093941
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| WBGene00093941 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-trp-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA04387 | ||||||||
| Molecular_name | PPA04387 | ||||||||
| PPA04387.1 | |||||||||
| PP72723 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000060805 | ||||||||
| UMM-S2845-27.35 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-trp-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-trp-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00274409 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Domain of unknown function DUF3447; Ankyrin repeats (3 copies); Ankyrin repeat; and Ankyrin repeat-containing domain superfamily. Is an ortholog of C. elegans trp-4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA04387 | |||||||
| Corresponding_transcript | PPA04387.1 | ||||||||
| Other_sequence | PPC19611_1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_1704 | |||||||
| GPL14372_Probes_1705 | |||||||||
| GPL14372_Probes_1706 | |||||||||
| Method | Gene |
