WormBase Tree Display for Gene: WBGene00096231
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WBGene00096231 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 9 | |||||||
Name | CGC_name | Ppa-unc-87 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA06677 | ||||||||
Molecular_name | PPA06677 | ||||||||
PPA06677.1 | |||||||||
PP57962 | |||||||||
Other_name | GENEPREDICTION_SNAP300000063039 | ||||||||
UMM-S397-1.35 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-unc-87 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:43 | WBPerson4055 | Name_change | CGC_name | Ppa-unc-87 | ||||
3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00203989 | ||||
4 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00204066 | ||||
5 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00205633 | ||||
6 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-87 | ||||
8 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-87 | ||||
Acquires_merge | WBGene00204066 | ||||||||
WBGene00203989 | |||||||||
WBGene00205633 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000032 | 22.8813 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 13.8197 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
18.5777 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00101020 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00108049 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273421 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00305012 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (3) | |||||||||
Experimental_info | Microarray_results (7) | ||||||||
Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
Remark | [190208 pad] The CGC name Ppa-unc-87 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-unc-87 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |