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WormBase Tree Display for Gene: WBGene00097802

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Name Class

WBGene00097802SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameCGC_namePpa-snt-1From_analysisInferred_from_orthology
Sequence_namePPA08248
Molecular_namePPA08248
PPA08248.1
PP61472
Other_nameGENEPREDICTION_SNAP300000064734
UMM-S394-0.6Person_evidenceWBPerson606
Public_namePpa-snt-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnt
RNASeq_FPKMWBls:00000325.76521From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.0566From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
3.4046From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00177107
Ortholog (28)
ParalogWBGene00090226Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090434Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097533Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114832Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118488Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118741Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274022Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277561Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00306036Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans snt-1. In C. elegans, snt-1 is involved in several processes, including defecation; regulation of pharyngeal pumping; and synaptic vesicle endocytosis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08248
Corresponding_transcriptPPA08248.1
Other_sequence (63)
MethodGene