WormBase Tree Display for Gene: WBGene00099093
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| WBGene00099093 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-hum-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA09539 | ||||||||
| Molecular_name | PPA09539 | ||||||||
| PPA09539.1 | |||||||||
| PP75348 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000066741 | ||||||||
| GENEPREDICTION_SNAP300000066744 | |||||||||
| GENEPREDICTION_SNAP300000066745 | |||||||||
| UMM-S2844-33.2 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-hum-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00099096 | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00099097 | ||||
| 4 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-hum-2 | ||||
| 6 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-hum-2 | ||||
| 8 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-hum-2 | ||||
| Acquires_merge | WBGene00099096 | ||||||||
| WBGene00099097 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hum | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.725867 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 2.1776 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00177702 | ||||||||
| 00177703 | |||||||||
| 00177704 | |||||||||
| 00177705 | |||||||||
| Ortholog | WBGene00072535 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WBGene00138286 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00136483 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00224128 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00243983 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
| Pan_g16273 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| WBGene00258328 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
| WBGene00288026 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA09539 | |||||||
| Corresponding_CDS_history | PPA09539:pp273 | ||||||||
| Corresponding_transcript | PPA09539.1 | ||||||||
| Other_sequence (30) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_33249 | |||||||
| GPL14372_Probes_33250 | |||||||||
| GPL14372_Probes_33252 | |||||||||
| GPL14372_Probes_33253 | |||||||||
| GPL14372_Probes_90930 | |||||||||
| GPL14372_Probes_90931 | |||||||||
| GPL14372_Probes_90932 | |||||||||
| GPL14372_Probes_90933 | |||||||||
| GPL14372_Probes_90935 | |||||||||
| GPL14372_Probes_90936 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| Remark | [190208 pad] The CGC name Ppa-hum-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200204 pad] The CGC name Ppa-hum-2 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00110055 | Curator_confirmed | WBPerson1983 | |||||||
| [210528 pad] The CGC name Ppa-hum-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
