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WormBase Tree Display for Gene: WBGene00099712

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Name Class

WBGene00099712SMapS_parentSequencePPA_ChrX
IdentityVersion4
NameSequence_namePPA10158
Molecular_namePPA10158
PPA10158.1
PP56414
Other_nameGENEPREDICTION_SNAP300000067205
GENEPREDICTION_SNAP300000080148
UMM-S328-4.0Person_evidenceWBPerson606
Public_namePPA10158
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00112814
324 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00203964
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00206245
Acquires_mergeWBGene00112814
WBGene00203964
WBGene00206245
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (20)
Paralog (70)
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF1759; Protein of unknown function (DUF1759); DNA/RNA polymerase superfamily; Pao retrotransposon peptidase; Aspartic peptidase domain superfamily; and Retrotransposon, Pao.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA10158
Corresponding_transcriptPPA10158.1
Other_sequenceJI175712.1
Experimental_infoMicroarray_resultsGPL14372_Probes_65289
Expression_clusterWBPaper00041472:Phosphorylated_protein
WBPaper00049334:PE_intestine_enriched
WBPaper00050265:C.albidus_vs_OP50_downregulated
WBPaper00050265:C.albidus_vs_OP50_upregulated
WBPaper00050265:C.curvatus_vs_OP50_downregulated
WBPaper00050265:C.curvatus_vs_OP50_upregulated
MethodGene