WormBase Tree Display for Gene: WBGene00100340
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| WBGene00100340 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA10786 | |||||||
| Molecular_name | PPA10786 | ||||||||
| PPA10786.1 | |||||||||
| PP73134 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000071846 | ||||||||
| UMM-S2840-4.42 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA10786 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-nhr-173 | ||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 6.70877 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 15.8512 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 6.70877 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 7.51999 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00178134 | ||||||||
| 00178135 | |||||||||
| 00178136 | |||||||||
| 00178137 | |||||||||
| Ortholog (80) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-173. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA10786 | |||||||
| Corresponding_transcript | PPA10786.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_71370 | |||||||
| GPL14372_Probes_71371 | |||||||||
| GPL14372_Probes_71372 | |||||||||
| GPL14372_Probes_71373 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-nhr-173 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
