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WormBase Tree Display for Gene: WBGene00100971

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Name Class

WBGene00100971SMapS_parentSequencePPA_ChrX
IdentityVersion4
NameCGC_namePpa-rpl-4From_analysisInferred_from_orthology
Sequence_namePPA11417
Molecular_namePPA11417
PPA11417.1
PP66384
Other_nameGENEPREDICTION_SNAP300000067869
GENEPREDICTION_SNAP300000082419
UMM-S250-11.62Person_evidenceWBPerson606
Public_namePpa-rpl-4
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00115248
324 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00205558
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00205932
Acquires_mergeWBGene00115248
WBGene00205558
WBGene00205932
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178434
00178435
00178436
Ortholog (31)
ParalogWBGene00273821Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273822Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274343Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277307Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279618Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00284752Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-4. In C. elegans, rpl-4 is involved in determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA11417
Corresponding_transcriptPPA11417.1
MethodGene