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WormBase Tree Display for Gene: WBGene00101220

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Name Class

WBGene00101220SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameCGC_namePpa-lgc-10From_analysisInferred_from_orthology
Sequence_namePPA11666
Molecular_namePPA11666
PPA11666.1
PP69369
Other_nameGENEPREDICTION_SNAP300000068607
UMM-S336-6.61Person_evidenceWBPerson606
Public_namePpa-lgc-10
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:00000322.63561From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.878537From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00178543
00178544
00178545
00178546
00178547
00178548
Ortholog (28)
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA11666
Corresponding_transcriptPPA11666.1
Other_sequence (11)
Experimental_infoMicroarray_resultsGPL14372_Probes_74103
GPL14372_Probes_74104
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene