WormBase Tree Display for Gene: WBGene00103609

WBGene00103609 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 1
    Name: CGC_name: Ppa-pha-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA14055
      Molecular_name: PPA14055
        PPA14055.1
        PP58115
      Other_name: GENEPREDICTION_SNAP300000070852
        UMM-S71-17.61 Person_evidence: WBPerson606
      Public_name: Ppa-pha-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pha
    RNASeq_FPKM: WBls:0000032 10.8615 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.8615 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        16.0353 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        8.9656 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00179515
      00179516
      00179517
    Ortholog (48)
    Paralog: WBGene00093064 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103608 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107654 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115600 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00202831 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273977 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277241 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277910 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278336 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278355 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans pha-4. In C. elegans, pha-4 is involved in several processes, including determination of adult lifespan; pharynx development; and positive regulation of metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA14055
    Corresponding_transcript: PPA14055.1
    Other_sequence: JI165106.1
      CRC07576_1
      CBC02574_1
      HBC04776_1
      EX014297.1
      SSC05465_1
      SS00024
      SS00077
      CR11553
  Experimental_info: Microarray_results: GPL14372_Probes_49841
      GPL14372_Probes_49844
      GPL14372_Probes_49845
    Expression_cluster: WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Down
  Method: Gene