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WormBase Tree Display for Gene: WBGene00105341

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Name Class

WBGene00105341SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameCGC_namePpa-acn-1From_analysisInferred_from_orthology
Sequence_namePPA15787
Molecular_namePPA15787
PPA15787.1
PP70028
Other_nameGENEPREDICTION_SNAP300000072512
UMM-S250-10.3Person_evidenceWBPerson606
Public_namePpa-acn-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacn
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.74315From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
5.22946From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00180301
00180302
00180303
00180304
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable metallopeptidase activity and peptidyl-dipeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of C. elegans acn-1. In C. elegans, acn-1 is involved in ecdysis, collagen and cuticulin-based cuticle and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA15787
Corresponding_transcriptPPA15787.1
Other_sequence (13)
Experimental_infoMicroarray_resultsGPL14372_Probes_88497
GPL14372_Probes_88498
GPL14372_Probes_88499
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_4M1_Down
WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
MethodGene