WormBase Tree Display for Gene: WBGene00105443

WBGene00105443 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 2
    Name: CGC_name: Ppa-sod-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA15889
      Molecular_name: PPA15889
        PPA15889.1
        PP40346
      Other_name: GENEPREDICTION_SNAP300000072614
        UMM-S250-5.38 Person_evidence: WBPerson606
      Public_name: Ppa-sod-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-sod-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sod
    RNASeq_FPKM: WBls:0000032 63.5249 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 180.109 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        63.5249 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        81.2113 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00180337
      00180338
      00180339
    Ortholog (48)
    Paralog: WBGene00094790 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099872 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable copper ion binding activity. Predicted to be involved in superoxide metabolic process. Is an ortholog of C. elegans sod-1. In C. elegans, sod-1 is involved in regulation of brood size; regulation of vulval development; and removal of superoxide radicals. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA15889
    Corresponding_transcript: PPA15889.1
    Other_sequence (45)
  Experimental_info: Microarray_results: GPL14372_Probes_88669
      GPL14372_Probes_88670
      GPL14372_Probes_88671
      GPL14372_Probes_88672
    Expression_cluster: WBPaper00041207:PP_dauer_up
  Method: Gene