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WormBase Tree Display for Gene: WBGene00105493

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Name Class

WBGene00105493SMapS_parentSequencePPA_ChrX
IdentityVersion3
NameSequence_namePPA15939
Molecular_namePPA15939
PPA15939.1
PP61522
Other_nameGENEPREDICTION_SNAP300000072664
GENEPREDICTION_SNAP300000072665
UMM-S250-2.44Person_evidenceWBPerson606
Public_namePPA15939
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00105494
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00105494
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000322.79096From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.57834From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.79096From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.94405From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00180369
Ortholog (33)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans ZC13.1 and tsp-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA15939
Corresponding_transcriptPPA15939.1
Other_sequence (37)
Experimental_infoMicroarray_resultsGPL14372_Probes_88797
GPL14372_Probes_88799
GPL14372_Probes_88800
GPL14372_Probes_88802
GPL14372_Probes_88803
GPL14372_Probes_88804
Expression_clusterWBPaper00041207:PP_dauer_up
Remark[180319 gw3] The CGC name Ppa-tsp-13 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene