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WormBase Tree Display for Gene: WBGene00106840

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Name Class

WBGene00106840SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameSequence_namePPA17286
Molecular_namePPA17286
PPA17286.1
PP67115
Other_nameGENEPREDICTION_SNAP300000073999
GENEPREDICTION_SNAP300000085179
UMM-S2840-67.11Person_evidenceWBPerson606
Public_namePPA17286
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00117943
Acquires_mergeWBGene00117943
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00180952
00180953
00180954
00180955
00180956
00180957
OrthologOTIPU.nOt.2.0.1.g01907Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01908Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03405Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03406Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04510Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05357Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12473Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12475Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13166Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13878Panagrellus redivivusFrom_analysisWormBase-Compara
Paralog (121)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-1; lgc-18; and lgc-29.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA17286
Corresponding_transcriptPPA17286.1
Experimental_infoMicroarray_resultsGPL14372_Probes_5267
GPL14372_Probes_5268
GPL14372_Probes_5269
GPL14372_Probes_5270
MethodGene