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WormBase Tree Display for Gene: WBGene00108236

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Name Class

WBGene00108236SMapS_parentSequencePPA_ChrX
IdentityVersion9
NameCGC_namePpa-ncs-7.2From_analysisInferred_from_orthology
Sequence_namePPA18682
Molecular_namePPA18682
PPA18682.1
PP71638
Other_nameGENEPREDICTION_SNAP300000075496
UMS-S293-0.35Person_evidenceWBPerson606
Ppa-ncs-7From_analysisInferred_from_orthology
Public_namePpa-ncs-7.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
209 Mar 2012 14:28:09WBPerson2970Name_changeCGC_namePpa-ncs-7
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-ncs-7.2
Other_namePpa-ncs-7
408 Feb 2019 15:42:26WBPerson1983Name_changeCGC_namePpa-ncs-7
Other_namePpa-ncs-7.2
508 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-ncs-7.2
Other_namePpa-ncs-7
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_namePpa-ncs-7
Other_namePpa-ncs-7.2
704 Jun 2020 14:38:22WBPerson1983Name_changeCGC_namePpa-ncs-7.2
Other_namePpa-ncs-7
828 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-ncs-7
Other_namePpa-ncs-7.2
928 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-ncs-7.2
Other_namePpa-ncs-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classncs
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00181694
OrthologWBGene00015867Caenorhabditis elegansFrom_analysisOMA
WBGene00025053Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00063199Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00123365Caenorhabditis japonicaFrom_analysisInparanoid_8
Pan_g7426Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00265943Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285929Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00092990Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106609Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107993Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118746Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281331Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans ncs-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA18682
Corresponding_transcriptPPA18682.1
Other_sequenceJI179558.1
Experimental_infoMicroarray_resultsGPL14372_Probes_75329
GPL14372_Probes_75330
MethodGene