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WormBase Tree Display for Gene: WBGene00108249

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Name Class

WBGene00108249SMapS_parentSequencePPA_ChrX
IdentityVersion3
NameSequence_namePPA18695
Molecular_namePPA18695
PPA18695.1
PP57125
Other_nameGENEPREDICTION_SNAP300000075509
GENEPREDICTION_SNAP300000075510
UMM-S293-1.73Person_evidenceWBPerson606
Public_namePPA18695
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00108250
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00108250
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
OrthologWBGene00140998Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029609Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225532Brugia malayiFrom_analysisWormBase-Compara
WBGene00006747Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00132921Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242542Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11896Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13029Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3276Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13311Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23154Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24936Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9712Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5431Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9019Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8811Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00338.g9432Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold466.g1610Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00643.g13939Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01746Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025582Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00710Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g8708Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0137200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00058608Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g20708Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267202Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286065Trichuris murisFrom_analysisWormBase-Compara
Paralog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Innexin. Is an ortholog of C. elegans unc-7. In C. elegans, unc-7 is involved in several processes, including regulation of multicellular organismal process; reproductive behavior; and response to anesthetic.Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA18695
Corresponding_transcriptPPA18695.1
Other_sequence (38)
Experimental_infoMicroarray_resultsGPL14372_Probes_22889
GPL14372_Probes_22890
GPL14372_Probes_22891
GPL14372_Probes_22892
GPL14372_Probes_22893
GPL14372_Probes_75384
Remark[180319 gw3] The CGC name Ppa-unc-7 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene