WormBase Tree Display for Gene: WBGene00108252

WBGene00108252 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 7
    Name: CGC_name: Ppa-seb-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA18698
      Molecular_name: PPA18698
        PPA18698.1
        PP61746
      Other_name: GENEPREDICTION_SNAP300000075512
        UMS-S293-1.52 Person_evidence: WBPerson606
      Public_name: Ppa-seb-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00206221
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-seb-3
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-seb-3
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-seb-3
      Acquires_merge: WBGene00206221
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: seb
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00181705
      00181706
      00181707
    Ortholog (23)
    Paralog: WBGene00091878 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103024 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109326 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112280 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278622 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans seb-3. In C. elegans, seb-3 is involved in behavioral response to ethanol; locomotory behavior; and response to heat. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA18698
    Corresponding_transcript: PPA18698.1
    Other_sequence (19)
  Experimental_info: Microarray_results: GPL14372_Probes_22894
      GPL14372_Probes_22895
      GPL14372_Probes_22896
      GPL14372_Probes_22897
      GPL14372_Probes_22898
      GPL14372_Probes_22899
      GPL14372_Probes_22900
      GPL14372_Probes_22901
    Expression_cluster: WBPaper00041472:Phosphorylated_protein
      WBPaper00049334:PE_intestine_enriched
      WBPaper00050265:C.albidus_vs_OP50_downregulated
      WBPaper00050265:C.albidus_vs_OP50_upregulated
      WBPaper00050265:C.curvatus_vs_OP50_downregulated
      WBPaper00050265:C.curvatus_vs_OP50_upregulated
  Remark: [190208 pad] The CGC name Ppa-seb-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-seb-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene