WormBase Tree Display for Gene: WBGene00108279

WBGene00108279 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 2
    Name: CGC_name: Ppa-erd-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA18725
      Molecular_name: PPA18725
        PPA18725.1
        PP26115
      Other_name: GENEPREDICTION_SNAP300000075539
        UMM-S293-2.8 Person_evidence: WBPerson606
        Ppa-erd-2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-erd-2.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Ppa-erd-2.1
                Other_name: Ppa-erd-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: erd
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00181718
      00181719
      00181720
    Ortholog (29)
    Paralog: WBGene00275339 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ER retention sequence binding activity. Predicted to be involved in protein retention in ER lumen. Predicted to be located in membrane. Is an ortholog of C. elegans erd-2.1. In C. elegans, erd-2.1 is involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA18725
    Corresponding_transcript: PPA18725.1
    Other_sequence (66)
  Experimental_info: Microarray_results: GPL14372_Probes_75473
      GPL14372_Probes_75474
      GPL14372_Probes_75477
    Expression_cluster: WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene