WormBase Tree Display for Gene: WBGene00108289
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WBGene00108289 | SMap | S_parent | Sequence | PPA_ChrX | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 5 | |||||||
Name | Sequence_name | PPA18735 | |||||||
Molecular_name | PPA18735 | ||||||||
PPA18735.1 | |||||||||
PP63740 | |||||||||
Other_name | GENEPREDICTION_SNAP300000075549 | ||||||||
UMM-S293-3.9 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA18735 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-egrh-1 | ||||
3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:22 | WBPerson1983 | Name_change | CGC_name | Ppa-egrh-3 | ||||
5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 3.13654 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 1.04551 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (31) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Is an ortholog of C. elegans egrh-1 and egrh-2. In C. elegans, egrh-1 is involved in negative regulation of oocyte maturation and negative regulation of ovulation. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA18735 | |||||||
Corresponding_transcript | PPA18735.1 | ||||||||
Other_sequence (20) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_75500 | |||||||
GPL14372_Probes_75501 | |||||||||
Remark | [190208 pad] The CGC name Ppa-egrh-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-egrh-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |