WormBase Tree Display for Gene: WBGene00108312
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| WBGene00108312 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-rund-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA18758 | ||||||||
| Molecular_name | PPA18758 | ||||||||
| PPA18758.1 | |||||||||
| PP54108 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075572 | ||||||||
| UMM-S293-4.37 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-rund-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 28 Apr 2014 09:34:47 | WBPerson2970 | Name_change | CGC_name | Ppa-rund-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rund | ||||||||
| RNASeq_FPKM | WBls:0000032 | 7.66965 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 2.26448 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 3.31138 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: RUN domain superfamily and RUN domain. Is an ortholog of C. elegans rund-1. In C. elegans, rund-1 is involved in several processes, including dense core granule maturation; positive regulation of behavior; and regulation of transport. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA18758 | |||||||
| Corresponding_transcript | PPA18758.1 | ||||||||
| Other_sequence (31) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_75538 | |||||||
| GPL14372_Probes_75539 | |||||||||
| GPL14372_Probes_75541 | |||||||||
| GPL14372_Probes_75542 | |||||||||
| GPL14372_Probes_75544 | |||||||||
| Method | Gene |
