WormBase Tree Display for Gene: WBGene00108378
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| WBGene00108378 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | CGC_name | Ppa-pfk-1.1.1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA18824 | ||||||||
| Molecular_name | PPA18824 | ||||||||
| PPA18824.1 | |||||||||
| PP61249 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075638 | ||||||||
| GENEPREDICTION_SNAP300000075640 | |||||||||
| GENEPREDICTION_SNAP300000075642 | |||||||||
| UMS-S293-6.67 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-pfk-1.1.1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108380 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108382 | ||||
| 4 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-pfk-1.1 | ||||
| 5 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-pfk-1.1 | ||||
| 7 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 8 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-pfk-1.1.1 | ||||
| Acquires_merge | WBGene00108380 | ||||||||
| WBGene00108382 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pfk | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.34325 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.976523 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 1.34325 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 1.58632 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00181787 | ||||||||
| 00181788 | |||||||||
| 00181789 | |||||||||
| 00181790 | |||||||||
| 00181791 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00276093 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable 6-phosphofructokinase activity and ATP binding activity. Predicted to be involved in fructose 6-phosphate metabolic process and glycolytic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans pfk-1.1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA18824 | |||||||
| Corresponding_transcript | PPA18824.1 | ||||||||
| Other_sequence (133) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_75702 | |||||||
| GPL14372_Probes_75703 | |||||||||
| GPL14372_Probes_75704 | |||||||||
| GPL14372_Probes_75705 | |||||||||
| GPL14372_Probes_75706 | |||||||||
| GPL14372_Probes_75707 | |||||||||
| GPL14372_Probes_75708 | |||||||||
| GPL14372_Probes_75709 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| Remark | [190208 pad] The CGC name Ppa-pfk-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200204 pad] The CGC name Ppa-pfk-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
