WormBase Tree Display for Gene: WBGene00108416
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| WBGene00108416 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-cccp-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA18862 | ||||||||
| Molecular_name | PPA18862 | ||||||||
| PPA18862.1 | |||||||||
| PP72967 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075676 | ||||||||
| GENEPREDICTION_SNAP300000075678 | |||||||||
| UMA-S293-8.44 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-cccp-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 21 Dec 2010 14:49:00 | WBPerson2970 | Name_change | CGC_name | Ppa-cccp-1 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108418 | ||||
| Acquires_merge | WBGene00108418 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cccp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 6.73229 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.32508 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 2.68579 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Coiled-coil domain-containing protein 186 and PDZ superfamily. Is an ortholog of C. elegans cccp-1. In C. elegans, cccp-1 is involved in dense core granule maturation and regulation of locomotion involved in locomotory behavior. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA18862 | |||||||
| Corresponding_transcript | PPA18862.1 | ||||||||
| Other_sequence (20) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_75772 | |||||||
| GPL14372_Probes_75775 | |||||||||
| GPL14372_Probes_75776 | |||||||||
| GPL14372_Probes_75777 | |||||||||
| GPL14372_Probes_75778 | |||||||||
| GPL14372_Probes_75780 | |||||||||
| GPL14372_Probes_75781 | |||||||||
| Expression_cluster | WBPaper00041606:PP_X.nematophila_regulated | ||||||||
| Method | Gene |
