WormBase Tree Display for Gene: WBGene00109114
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| WBGene00109114 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | Sequence_name | PPA19560 | |||||||
| Molecular_name | PPA19560 | ||||||||
| PPA19560.1 | |||||||||
| PP20638 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000076395 | ||||||||
| UMM-S285-12.46 | Person_evidence | WBPerson606 | |||||||
| Ppa-col-72 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | PPA19560 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:46 | WBPerson2970 | Name_change | CGC_name | Ppa-col-72 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Ppa-col-72.1 | ||||
| Other_name | Ppa-col-72 | ||||||||
| 4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-col-72 | ||||
| Other_name | Ppa-col-72.1 | ||||||||
| 5 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-col-72 | ||||
| 7 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-col-72.1 | ||||
| Other_name | Ppa-col-72 | ||||||||
| 8 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (62) | |||||||||
| Paralog (148) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans col-68; col-72; and col-87. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA19560 | |||||||
| Corresponding_transcript | PPA19560.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_31914 | |||||||
| GPL14372_Probes_31915 | |||||||||
| GPL14372_Probes_31916 | |||||||||
| GPL14372_Probes_31917 | |||||||||
| Remark | [200204 pad] The CGC name Ppa-col-72 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210728 pad] The CGC name Ppa-col-72.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
