WormBase Tree Display for Gene: WBGene00109585

WBGene00109585 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 2
    Name: CGC_name: Ppa-vhp-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA20031
      Molecular_name: PPA20031
        PPA20031.1
        PP75275
      Other_name: GENEPREDICTION_SNAP300000076574
        UMM-S10-88.37 Person_evidence: WBPerson606
      Public_name: Ppa-vhp-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 26 Sep 2019 11:24:36 WBPerson4055 Event: Acquires_merge: WBGene00282298
      Acquires_merge: WBGene00282298
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vhp
    RNASeq_FPKM: WBls:0000032 8.41767 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.45687 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        7.95295 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00182375
      00182376
      00182377
      00182378
    Ortholog (33)
    Paralog: WBGene00092163 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092743 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093477 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093663 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096089 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096507 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096912 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112904 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273212 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281590 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans vhp-1. In C. elegans, vhp-1 is involved in several processes, including regulation of cellular response to stress; regulation of defense response to bacterium; and regulation of protein localization to nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA20031
    Corresponding_CDS_history: PPA20031:pp273
    Corresponding_transcript: PPA20031.1
    Other_sequence (25)
  Experimental_info: Microarray_results: GPL14372_Probes_13107
      GPL14372_Probes_13108
      GPL14372_Probes_13109
      GPL14372_Probes_13110
    Expression_cluster: WBPaper00041472:Phosphorylated_protein
      WBPaper00050265:C.albidus_vs_OP50_upregulated
  Method: Gene