WormBase Tree Display for Gene: WBGene00109878

WBGene00109878 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 1
    Name: Sequence_name: PPA20324
      Molecular_name: PPA20324
        PPA20324.1
        PP47764
      Other_name: GENEPREDICTION_SNAP300000077134
        UMM-S2857-4.59 Person_evidence: WBPerson606
      Public_name: PPA20324
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 57.5876 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 27.2217 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        28.2698 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog: WBGene00025068 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00009484 Caenorhabditis elegans From_analysis: WormBase-Compara
      CSP26.g950 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g6048 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP38.g20227 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7777 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07518 Oscheius tipulae From_analysis: WormBase-Compara
      chrX_pilon.g19793 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00290193 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00098086 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274079 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276861 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: LPS-induced tumour necrosis factor alpha factor; LITAF-like zinc ribbon domain; and LITAF domain containing protein. Is an ortholog of C. elegans F36G3.3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA20324
    Corresponding_transcript: PPA20324.1
  Experimental_info: Microarray_results: GPL14372_Probes_76681
      GPL14372_Probes_76682
      GPL14372_Probes_76683
  Method: Gene