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WormBase Tree Display for Gene: WBGene00109939

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Name Class

WBGene00109939SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameCGC_namePpa-tap-1From_analysisInferred_from_orthology
Sequence_namePPA20385
Molecular_namePPA20385
PPA20385.1
PP75285
Other_nameGENEPREDICTION_SNAP300000077195
UMM-S2857-8.19Person_evidenceWBPerson606
Public_namePpa-tap-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtap
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00182518
00182519
OrthologWBGene00006524Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00029557Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00058520Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00164091Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00184473Caenorhabditis japonicaFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine phosphatase activity. Is an ortholog of C. elegans tap-1. In C. elegans, tap-1 is involved in endodermal cell fate specification and negative regulation of Ras protein signal transduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20385
Corresponding_CDS_historyPPA20385:pp273
Corresponding_transcriptPPA20385.1
MethodGene