WormBase Tree Display for Gene: WBGene00109947
expand all nodes | collapse all nodes | view schema
| WBGene00109947 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | PPA20393 | |||||||
| Molecular_name | PPA20393 | ||||||||
| PPA20393.1 | |||||||||
| PP71851 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000077203 | ||||||||
| UMM-S2857-8.48 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA20393 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 26.367 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 15.7094 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 20.7612 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; SCP2 sterol-binding domain; SCP-2 sterol transfer family; NAD(P)-binding domain superfamily; and SCP2 sterol-binding domain superfamily. Is an ortholog of C. elegans dhs-28. In C. elegans, dhs-28 is involved in several processes, including carbohydrate derivative metabolic process; dauer entry; and positive regulation of developmental process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA20393 | |||||||
| Corresponding_transcript | PPA20393.1 | ||||||||
| Other_sequence (68) | |||||||||
| Method | Gene |
