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WormBase Tree Display for Gene: WBGene00110178

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Name Class

WBGene00110178SMapS_parentSequencePPA_ChrX
IdentityVersion3
NameSequence_namePPA20624
Molecular_namePPA20624
PPA20624.1
PP63279
Other_nameGENEPREDICTION_SNAP300000079717
UMM-S2845-10.53Person_evidenceWBPerson606
Public_namePPA20624
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
218 Nov 2011 16:33:15WBPerson2970Name_changeCGC_nameRemoved
324 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204523
Acquires_mergeWBGene00204523
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000324.69635From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.33874From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.69635From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
8.31988From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00182627
00182628
00182629
00182630
00182631
00182632
OrthologWBGene00139075Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00190665Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00268467Brugia malayiFrom_analysisWormBase-Compara
WBGene00246301Onchocerca volvulusFrom_analysisWormBase-Compara
CSP38.g365Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g6189Caenorhabditis quiockensisFrom_analysisWormBase-Compara
Pan_g22206Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00262473Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20624
Corresponding_transcriptPPA20624.1
Experimental_infoMicroarray_resultsGPL14372_Probes_74953
GPL14372_Probes_74954
GPL14372_Probes_74955
GPL14372_Probes_74956
GPL14372_Probes_74957
GPL14372_Probes_74958
GPL14372_Probes_74959
MethodGene