WormBase Tree Display for Gene: WBGene00110181
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| WBGene00110181 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-octr-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA20627 | ||||||||
| Molecular_name | PPA20627 | ||||||||
| PPA20627.1 | |||||||||
| PP73686 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000079720 | ||||||||
| Ppa-tag-24 | From_analysis | Inferred_from_orthology | |||||||
| UMA-S2845-10.6 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-octr-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 11 Dec 2009 11:55:24 | WBPerson2970 | Name_change | CGC_name | Ppa-octr-1 | ||||
| Other_name | Ppa-tag-24 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | octr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 11.8803 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 3.9601 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00182633 | ||||||||
| 00182634 | |||||||||
| 00182635 | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00115705 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00278721 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans octr-1. In C. elegans, octr-1 is involved in negative regulation of innate immune response; octopamine signaling pathway; and regulation of IRE1-mediated unfolded protein response. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA20627 | |||||||
| Corresponding_transcript | PPA20627.1 | ||||||||
| Other_sequence (15) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_74962 | |||||||
| GPL14372_Probes_74963 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
