WormBase Tree Display for Gene: WBGene00110219
expand all nodes | collapse all nodes | view schema
WBGene00110219 | SMap | S_parent | Sequence | PPA_ChrX | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||||
Name | Sequence_name | PPA20665 | |||||||
Molecular_name | PPA20665 | ||||||||
PPA20665.1 | |||||||||
PP61266 | |||||||||
Other_name | GENEPREDICTION_SNAP300000079758 | ||||||||
GENEPREDICTION_SNAP300000079759 | |||||||||
UMM-S2845-12.54 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA20665 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-nfya-1 | ||||
3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00110220 | ||||
4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
Acquires_merge | WBGene00110220 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 9.49627 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 5.03467 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
5.60775 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
GO_annotation | 00182658 | ||||||||
00182659 | |||||||||
Ortholog (36) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nfya-1 and nfya-2. In C. elegans, nfya-1 is involved in negative regulation of transcription by RNA polymerase II; positive regulation of nematode male tail tip morphogenesis; and tissue development. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA20665 | |||||||
Corresponding_transcript | PPA20665.1 | ||||||||
Other_sequence | Dviv_isotig16798 | ||||||||
JI483173.1 | |||||||||
Dviv_isotig16799 | |||||||||
JI175722.1 | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_75076 | |||||||
GPL14372_Probes_75077 | |||||||||
GPL14372_Probes_75078 | |||||||||
GPL14372_Probes_75079 | |||||||||
GPL14372_Probes_75080 | |||||||||
GPL14372_Probes_75081 | |||||||||
GPL14372_Probes_75082 | |||||||||
GPL14372_Probes_75083 | |||||||||
Remark | [180319 gw3] The CGC name Ppa-nfya-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
Method | Gene |