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WormBase Tree Display for Gene: WBGene00110219

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Name Class

WBGene00110219SMapS_parentSequencePPA_ChrX
IdentityVersion4
NameSequence_namePPA20665
Molecular_namePPA20665
PPA20665.1
PP61266
Other_nameGENEPREDICTION_SNAP300000079758
GENEPREDICTION_SNAP300000079759
UMM-S2845-12.54Person_evidenceWBPerson606
Public_namePPA20665
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:42WBPerson4055Name_changeCGC_namePpa-nfya-1
324 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00110220
420 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00110220
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000329.49627From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001015.03467From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
5.60775From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00182658
00182659
Ortholog (36)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nfya-1 and nfya-2. In C. elegans, nfya-1 is involved in negative regulation of transcription by RNA polymerase II; positive regulation of nematode male tail tip morphogenesis; and tissue development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20665
Corresponding_transcriptPPA20665.1
Other_sequenceDviv_isotig16798
JI483173.1
Dviv_isotig16799
JI175722.1
Experimental_infoMicroarray_resultsGPL14372_Probes_75076
GPL14372_Probes_75077
GPL14372_Probes_75078
GPL14372_Probes_75079
GPL14372_Probes_75080
GPL14372_Probes_75081
GPL14372_Probes_75082
GPL14372_Probes_75083
Remark[180319 gw3] The CGC name Ppa-nfya-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene