WormBase Tree Display for Gene: WBGene00111205
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WBGene00111205 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | Ppa-lim-6 | Inferred_automatically | from gene merge | |||||
Sequence_name | PPA21651 | ||||||||
Molecular_name | PPA21651 | ||||||||
PPA21651.1 | |||||||||
PP70209 | |||||||||
Other_name | GENEPREDICTION_SNAP300000078392 | ||||||||
GENEPREDICTION_SNAP300000078393 | |||||||||
UMM-S207-5.29 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-lim-6 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-lim-6 | ||||
3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00111206 | ||||
Acquires_merge | WBGene00111206 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lim | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
21.3421 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
7.11403 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
GO_annotation | 00183062 | ||||||||
Ortholog (27) | |||||||||
Paralog (9) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-6. In C. elegans, lim-6 is involved in several processes, including regulation of gene expression; system process; and uterus morphogenesis. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA21651 | |||||||
Corresponding_transcript | PPA21651.1 | ||||||||
Other_sequence | JI212657.1 | ||||||||
SS02867 | |||||||||
TS05827 | |||||||||
Acan_isotig17193 | |||||||||
SSC02344_1 | |||||||||
Dviv_isotig26261 | |||||||||
TSC06900_1 | |||||||||
ES570229.1 | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_77630 | |||||||
GPL14372_Probes_77631 | |||||||||
Method | Gene |