WormBase Tree Display for Gene: WBGene00113195

WBGene00113195 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 1
    Name: CGC_name: Ppa-unc-108 From_analysis: Inferred_from_orthology
      Sequence_name: PPA23641
      Molecular_name: PPA23641
        PPA23641.1
        PP73364
      Other_name: GENEPREDICTION_SNAP300000080527
        UMM-S13-5.29 Person_evidence: WBPerson606
      Public_name: Ppa-unc-108
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00184028
      00184029
    Ortholog: WBGene00006833 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
      WBGene00033026 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062307 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155474 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00160355 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00224578 Brugia malayi From_analysis: WormBase-Compara
      WBGene00008671 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008672 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00209466 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237917 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9307 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g565 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4287 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6907 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1878 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20433 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13432 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g333 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9840 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16455 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00042.g2304 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-108 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6738 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00111.g4613 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08188 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002190 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05523 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13928 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10164210 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17072 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrV_pilon.g17073 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261323 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294642 Trichuris muris From_analysis: WormBase-Compara
    Paralog (37)
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans unc-108. In C. elegans, unc-108 is involved in several processes, including dense core granule maturation; phagosome maturation involved in apoptotic cell clearance; and regulation of locomotion involved in locomotory behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA23641
    Corresponding_transcript: PPA23641.1
    Other_sequence: ACC01676_1
      RS08801
      PTC00955_1
      GP01063
      JI227489.1
      CSC00153_1
      EX912407.1
      Name_isotig01070
      EX011842.1
      EX010640.1
      EX553648.1
      HGC00788_1
      FG588662.1
      Tcol_isotig08775
      FG588117.1
      EX565743.1
      CRC03323_1
      EX911289.1
      CJC03774_1
      SSC00790_1
      GO250341.1
      ACC13047_1
      NBC00207_1
      RSC04457_1
      ES739110.1
      EX916472.1
      EX013265.1
      HC03832
      EX010807.1
      EX555614.1
      EX009830.1
      Tcol_isotig08776
      GPC00534_1
      BU087554.1
      Acan_isotig12781
      CBC03575_1
      EX916522.1
      NB06618
      Acan_isotig06114
      FC816561.1
      AE03997
      BUC00129_1
      FG618950.1
      CGC00210_1
      RS09139
      Acan_isotig06115
      CBC17677_1
      EX012684.1
      Dviv_isotig23404
      ES409464.1
      XI03685
      HG03345
      GR12348
      HBC21442_1
      GP02586
      XIC01385_1
      HBC02348_1
      CR02216
      FC811087.1
      EX912208.1
      EX014331.1
      Oden_isotig19898
      PT00149
      EX558074.1
      ES560638.1
      GR14091
      PPC05439_1
      AYC02779_1
      GPC01589_1
      PTC00845_1
      SRC00876_1
      GRC00104_1
      HG12162
      DN152845.1
      PT01384
      TS02892
      EX914257.1
      EX912363.1
      SR00402
      SS01500
      FD514392.1
      HC08979
      HBC06406_1
      SS01373
      ES414193.1
      ES413319.1
      ES744103.1
      CJC03260_1
      HCC02153_1
      JI483332.1
      EX911911.1
      GP03012
      SSC00057_1
      EY468665.1
      JI212779.1
      BU665961.1
      GP03146
      EX013853.1
      ES409602.1
      NAC00736_1
      TSC05508_1
      Hbac_isotig02254
      EX013511.1
      RSC01266_1
  Experimental_info: Microarray_results: GPL14372_Probes_48017
      GPL14372_Probes_48018
      GPL14372_Probes_48019
      GPL14372_Probes_48020
  Method: Gene