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WormBase Tree Display for Gene: WBGene00113196

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Name Class

WBGene00113196SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameCGC_namePpa-unc-15From_analysisInferred_from_orthology
Sequence_namePPA23642
Molecular_namePPA23642
PPA23642.1
PP57157
Other_nameGENEPREDICTION_SNAP300000080528
UMA-S13-5.49Person_evidenceWBPerson606
Public_namePpa-unc-15
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000321.33162From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.443873From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00184030
OrthologWBGene00006754Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00032961Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00067647Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00145817Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00185033Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00163650Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00134246Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP26.g1125Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12989Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10792Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13858Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14610Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g1019Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_04016.g18546Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-15Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17276Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03488.g30355Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18447Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000119Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12001Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_10088300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1378Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00290118Trichuris murisFrom_analysisWormBase-Compara
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to be part of myosin complex. Is an ortholog of C. elegans unc-15. In C. elegans, unc-15 is involved in several processes, including positive regulation of ovulation; positive regulation of sarcomere organization; and skeletal muscle myosin thick filament assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA23642
Corresponding_transcriptPPA23642.1
Other_sequence (229)
Experimental_infoMicroarray_resultsGPL14372_Probes_48014
MethodGene